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Helix-like structure formation of a semi-flexible chain confined in a cylinder channel |
Xiaohui Wen(温晓会)1,2, Tieyu Sun(孙铁昱)2, Wei-Bing Zhang(张卫兵)3, Chi-Hang Lam(林志恒)2, Linxi Zhang(章林溪)4, Huaping Zang(臧华平)5 |
1. Department of Applied Physics, Chengdu University of Technology, Chengdu 610059, China;
2. Department of Applied Physics, The Hong Kong Polytechnic University, Hong Kong SAR, China;
3. School of Physics and Electronic Sciences, Changsha University of Science and Technology, Changsha 410004, China;
4. Department of Physics, Zhejiang University, Hangzhou 310027, China;
5. School of Physics and Engineering, Zhengzhou University, Zhengzhou 450002, China |
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Abstract Molecular dynamics method is used to study the conformation behavior of a semi-flexible polymer chain confined in a cylinder channel. A novel helix-like structure is found to form during the simulation. Moreover, the detailed characteristic parameters and formation probability of these helix-like structures under moderate conditions are investigated. We find that the structure is not a perfect helix, but a bundle of elliptical turns. In addition, we conduct a statistical analysis for the chain monomer distribution along the radial direction. This research contributes to our understanding of the microscopic conformation of polymer chains in confined environments filled with a solvent.
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Received: 21 February 2016
Revised: 25 April 2016
Accepted manuscript online:
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PACS:
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36.20.Ey
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(Conformation (statistics and dynamics))
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87.15.A-
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(Theory, modeling, and computer simulation)
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87.15.ap
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(Molecular dynamics simulation)
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02.50.-r
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(Probability theory, stochastic processes, and statistics)
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Fund: Project supported by the National Natural Science Foundation of China (Grant Nos. 11504033 and 11404290) and the General Research Fund of Hong Kong Research Council of China (Grant No. 15301014). |
Corresponding Authors:
Xiaohui Wen
E-mail: wenxiaohui_2006@126.com
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Cite this article:
Xiaohui Wen(温晓会), Tieyu Sun(孙铁昱), Wei-Bing Zhang(张卫兵), Chi-Hang Lam(林志恒), Linxi Zhang(章林溪), Huaping Zang(臧华平) Helix-like structure formation of a semi-flexible chain confined in a cylinder channel 2016 Chin. Phys. B 25 093601
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