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Chinese Physics, 2003, Vol. 12(3): 310-314    DOI: 10.1088/1009-1963/12/3/311
CONDENSED MATTER: STRUCTURAL, MECHANICAL, AND THERMAL PROPERTIES Prev   Next  

Solving a superstructure from two-wavelength x-ray powder diffraction data - a simulation

Chen Jian-Rong (陈建荣), Gu Yuan-Xin (古元新), Fan Hai-Fu (范海福)
Institute of Physics, Chinese Academy of Science, Beijing 100080, China
Abstract  Two different kinds of phase ambiguities are intrinsic in two-wavelength x-ray powder diffraction from acentric crystal structures having pseudo-translation symmetry. In a test calculation we have solved the problem for the first time by two different phasing procedures developed originally in single-crystal structure analysis. They are the direct method of breaking enantiomorphous phase ambiguity in protein crystallography and that of breaking translational phase ambiguity for superstructures. An artificial structure was used in the test, which is based on atomic coordinates of the known structure, SHAS (C$_5$H$_6$O$_5$N$_3$K), with the atom K replaced by Rb. The arrangement of Rb atoms possesses a subperiodicity of $t=(a+b+c)/2$. Two-wavelength synchrotron x-ray powder diffraction data were simulated with $\lambda_1=0.0816$nm and $\lambda_2=0.1319$nm. Overlapped reflections were uniformly decomposed at the beginning and redecomposed afterward when the partial-structure information became available. The enantiomorphous phase ambiguity was resolved only for reflections with $h+k+l$ even. Phases of reflections with $h+k+l$ odd were derived by the direct method of solving superstructures. A fragment was then obtained, which led to the complete structure in five cycles of Fourier iteration.
Keywords:  two-wavelength powder diffraction      superstructures      direct methods  
Received:  02 February 2002      Revised:  09 August 2002      Accepted manuscript online: 
PACS:  61.50.Ah (Theory of crystal structure, crystal symmetry; calculations and modeling)  
  61.66.Hq (Organic compounds)  
Fund: Project supported by the National Natural Science Foundation of China (Grant No 19974068).

Cite this article: 

Chen Jian-Rong (陈建荣), Gu Yuan-Xin (古元新), Fan Hai-Fu (范海福) Solving a superstructure from two-wavelength x-ray powder diffraction data - a simulation 2003 Chinese Physics 12 310

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