中国物理B ›› 2020, Vol. 29 ›› Issue (10): 108708-.doi: 10.1088/1674-1056/abb7f3
Huiwen Wang(王慧雯)1, Yunjie Zhao(赵蕴杰)1,†()
收稿日期:
2020-04-30
修回日期:
2020-07-07
接受日期:
2020-09-14
出版日期:
2020-10-05
发布日期:
2020-10-05
通讯作者:
Yunjie Zhao(赵蕴杰)
Huiwen Wang(王慧雯) and Yunjie Zhao(赵蕴杰)†
Received:
2020-04-30
Revised:
2020-07-07
Accepted:
2020-09-14
Online:
2020-10-05
Published:
2020-10-05
Contact:
†Corresponding author. E-mail: About author:
中图分类号: (RNA)
Huiwen Wang(王慧雯), Yunjie Zhao(赵蕴杰). [J]. 中国物理B, 2020, 29(10): 108708-.
Huiwen Wang(王慧雯) and Yunjie Zhao(赵蕴杰)†. Methods and applications of RNA contact prediction[J]. Chin. Phys. B, 2020, 29(10): 108708-.
"
Method name | Input information | Comments | Link | Reference |
---|---|---|---|---|
Mutual Information | RNA sequence | intramolecular contacts | http://dca.rice.edu/portal/dca/home | [ |
mpDCA | RNA sequence | intramolecular contacts | not available | [ |
mfDCA | RNA sequence | intramolecular contacts | http://dca.rice.edu/portal/dca/home | [ |
plmDCA | RNA sequence | intramolecular contacts | https://github.com/magnusekeberg/plmDCA | [ |
DIRECT | RNA sequence and structure | intramolecular contacts | https://zhaolab.com.cn/DIRECT/ | [ |
Rsite | RNA structure | intermolecular contacts | http://www.cuilab.cn/rsite | [ |
Rsite2 | RNA structure | intermolecular contacts | http://www.cuilab.cn/rsite2 | [ |
RBind | RNA structure | intermolecular contacts | https://zhaolab.com.cn/RBind/ | [ |
PRIdictor | RNA and protein sequences | intermolecular contacts | http://bclab.inha.ac.kr/pridictor/ | [ |
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