中国物理B ›› 2026, Vol. 35 ›› Issue (7): 76803-076803.doi: 10.1088/1674-1056/ae504e

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Molecular dynamics insights into limited impact of nanoscale defects on lithocholic acid adsorption on graphene

Rui-Jian Yang(杨瑞建)1 and Zhi-Gang Shao(邵志刚)1,2,†   

  1. 1 Guangdong Basic Research Center of Excellence for Structure and Fundamental Interactions of Matter, Guangdong Provincial Key Laboratory of Quantum Engineering and Quantum Materials, School of Physics, South China Normal University, Guangzhou 510006, China;
    2 Guangdong-Hong Kong Joint Laboratory of Quantum Matter, Frontier Research Institute for Physics, South China Normal University, Guangzhou 510006, China
  • 收稿日期:2025-09-19 修回日期:2026-02-02 接受日期:2026-03-11 发布日期:2026-07-15
  • 通讯作者: Zhi-Gang Shao E-mail:zgshao@scnu.edu.cn
  • 基金资助:
    Project supported by the National Natural Science Foundation of China (Grant No. 52072132).

Molecular dynamics insights into limited impact of nanoscale defects on lithocholic acid adsorption on graphene

Rui-Jian Yang(杨瑞建)1 and Zhi-Gang Shao(邵志刚)1,2,†   

  1. 1 Guangdong Basic Research Center of Excellence for Structure and Fundamental Interactions of Matter, Guangdong Provincial Key Laboratory of Quantum Engineering and Quantum Materials, School of Physics, South China Normal University, Guangzhou 510006, China;
    2 Guangdong-Hong Kong Joint Laboratory of Quantum Matter, Frontier Research Institute for Physics, South China Normal University, Guangzhou 510006, China
  • Received:2025-09-19 Revised:2026-02-02 Accepted:2026-03-11 Published:2026-07-15
  • Contact: Zhi-Gang Shao E-mail:zgshao@scnu.edu.cn
  • Supported by:
    Project supported by the National Natural Science Foundation of China (Grant No. 52072132).

摘要: Lithocholic acid (LCA), a bile acid metabolite with demonstrated lifespan-extension capabilities, holds considerable biomedical promise. The development of nano-enabled platforms, such as those based on two-dimensional (2D) materials, is crucial to empower its future applications in drug delivery and sensing. For fundamental mechanistic studies, graphene serves as an ideal model system owing to its structural simplicity and computational tractability, which allow for precise control and reliable simulation of its surface properties, such as through defect engineering. However, the adsorption behavior of LCA on graphene surfaces, particularly the mechanistic role of surface defects that are central to tailoring material properties, remains inadequately characterized. To elucidate the underlying physical principles governing this interaction, we employed molecular dynamics simulations to systematically compare LCA binding on ideal graphene (I-Gra) and a series of defective graphene (D-Gra) models with varying defect sizes and edge chemistries. Our results reveal that the binding free energy of LCA converges to a similar value across all surfaces, indicating a limited impact of nanoscale defects. Structural analysis shows that while hydrophilic defect edges form strong, localized hydrogen bonds with water, the overall architecture of the interfacial hydration layer remains largely preserved. This confinement of defect influence leads to minimal variation in the non-polar solvation free energy, the key thermodynamic term governing hydrophobic adsorption. Consequently, the adsorption strength exhibits remarkable robustness against the investigated defects. These findings elucidate a defect-insensitive adsorption mechanism, highlighting that the continuous hydrophobic graphene plane, not localized defect features, dominates the interaction. This insight provides a crucial theoretical foundation for predicting the performance of realistic, non-ideal graphene interfaces in LCA-related biomedical applications.

关键词: lithocholic acid, graphene, molecular dynamics simulation, defect engineering, binding free energy

Abstract: Lithocholic acid (LCA), a bile acid metabolite with demonstrated lifespan-extension capabilities, holds considerable biomedical promise. The development of nano-enabled platforms, such as those based on two-dimensional (2D) materials, is crucial to empower its future applications in drug delivery and sensing. For fundamental mechanistic studies, graphene serves as an ideal model system owing to its structural simplicity and computational tractability, which allow for precise control and reliable simulation of its surface properties, such as through defect engineering. However, the adsorption behavior of LCA on graphene surfaces, particularly the mechanistic role of surface defects that are central to tailoring material properties, remains inadequately characterized. To elucidate the underlying physical principles governing this interaction, we employed molecular dynamics simulations to systematically compare LCA binding on ideal graphene (I-Gra) and a series of defective graphene (D-Gra) models with varying defect sizes and edge chemistries. Our results reveal that the binding free energy of LCA converges to a similar value across all surfaces, indicating a limited impact of nanoscale defects. Structural analysis shows that while hydrophilic defect edges form strong, localized hydrogen bonds with water, the overall architecture of the interfacial hydration layer remains largely preserved. This confinement of defect influence leads to minimal variation in the non-polar solvation free energy, the key thermodynamic term governing hydrophobic adsorption. Consequently, the adsorption strength exhibits remarkable robustness against the investigated defects. These findings elucidate a defect-insensitive adsorption mechanism, highlighting that the continuous hydrophobic graphene plane, not localized defect features, dominates the interaction. This insight provides a crucial theoretical foundation for predicting the performance of realistic, non-ideal graphene interfaces in LCA-related biomedical applications.

Key words: lithocholic acid, graphene, molecular dynamics simulation, defect engineering, binding free energy

中图分类号:  (Graphene films)

  • 68.65.Pq
68.43.-h (Chemisorption/physisorption: adsorbates on surfaces) 68.08.Bc (Wetting)