[1] Fletcher P D, Howe A M and Robinson B H 1987 Journal of the Chemical Society, Faraday Transactions 1: Physical Chemistry in Condensed Phases 83 985 [2] Buttinoni I, Bialké J, Kümmel F, Löwen H, Bechinger C and Speck T 2013 Phys. Rev. Lett. 110 238301 [3] Tung C, Harder J, Valeriani C and Cacciuto A 2016 Soft Matter 12 555 [4] Richard D, Löwen H and Speck T 2016 Soft Matter 12 5257 [5] Baumgart T, Hammond A T, Sengupta P, Hess S T, Holowka D A, Baird B A and Webb W W 2007 Proc. Nat. Acad. Sci. USA 104 3165 [6] Chong P A and Forman-Kay J D 2016 Current Opinion in Structural Biology 41 180 [7] Zola R S, Evangelista L, Yang Y C and Yang D K 2013 Phys. Rev. Lett. 110 057801 [8] Bažec M and Žumer S 2006 Phys. Rev. E 73 021703 [9] Jeon Y, Jamil M, Lee H D and Rhee J 2008 Pramana 71 559 [10] Connell S D and Smith D A 2006 Molecular Membrane Biology 23 17 [11] Girelli A, Rahmann H, Begam N, Ragulskaya A, Reiser M, Chandran S, Westermeier F, Sprung M, Zhang F, Gutt C, et al. 2021 Phys. Rev. Lett. 126 138004 [12] Novik K E and Coveney P V 2000 Phys. Rev. E 61 435 [13] Shimizu R and Tanaka H 2015 Nat. Commun. 6 7407 [14] Das K and Das S K 2023 Phys. Rev. E 107 044116 [15] Gidituri H, Akella V, Vedantam S and Panchagnula MV 2019 J. Chem. Phys. 150 234903 [16] Laradji M, Mouritsen O G, Toxvaerd S and Zuckermann M J 1994 Phys. Rev. E 50 1243 [17] Ahmad S, Das S K and Puri S 2012 Phys. Rev. E 85 031140 [18] Perlmutter J D and Sachs J N 2011 Biophys. J. 100 491a [19] Warren P B 1998 Current Opinion in Colloid & Interface Science 3 620 [20] Cai H, Vernon R M and Forman-Kay J D 2022 Biomolecules 12 1131 [21] Zhang P and Chern G W 2021 Phys. Rev. Lett. 127 146401 [22] Lopez C A, Vesselinov V V, Gnanakaran S and Alexandrov B S 2019 J. Chem. Theory Comput. 15 6343 [23] Chang Y C, Chen Y J, Chen P Y, Chen Y C, Maqbool F, Ho T Y and Chiang Y Y 2023 ACS Appl. Mater. Interfaces 15 12473 [24] Mandal R, Casert C and Sollich P 2022 Nat. Commun. 13 4424 [25] Chu X, Sun T, Li Q, Xu Y, Zhang Z, Lai L and Pei J 2022 BMC Bioinformatics 23 72 [26] Noe F, Tkatchenko A, Müller K R and Clementi C 2020 Annu. Rev. Phys. Chem. 71 361 [27] Zhang K, Li X, Jin Y and Jiang Y 2022 Soft Matter 18 6270 [28] Boattini E, Smallenburg F and Filion L 2021 Phys. Rev. Lett. 127 088007 [29] Mokhtar F, Kansal R, Diaz D, Duarte J M, Pata J, Pierini M and Vli mant J R 2021 arXiv:2111.12840v1 [physics.data-an] [30] Shen Z A, Luo T, Zhou Y K, Yu H and Du P F 2021 Briefings in Bioinformatics 22 bbab051 [31] Ha S and Jeong H 2021 Sci. Rep. 11 12804 [32] Wang R, Fang F, Cui J and Zheng W 2022 Sci. Rep. 12 500 [33] Zhao H, Wang R, Zhao C and Zheng W 2023 Chin. Phys. B 32 056402 [34] Liu Y, Wang R, Zhao C and Zheng W 2022 Chin. Phys. B 31 116401 [35] Sanchez-Gonzalez A, Godwin J, Pfaff T, Ying R, Leskovec J and Battaglia P 2020 Proceedings of the 37th International Conference on Machine Learning, July 13-18, 2020, Virtual, p. 8459 [36] Bapst V, Keck T, Grabska-Barwińska A, Donner C, Cubuk E D, Schoenholz S S, Obika A, Nelson A W, Back T, Hassabis D, et al. 2020 Nat. Phys. 16 448 [37] Shiba H, Hanai M, Suzumura T and Shimokawabe T 2023 J. Chem. Phys. 158 084503 [38] Groot R D and Warren P B 1997 J. Chem. Phys. 107 4423 [39] Visser D, Hoefsloot H C and Iedema P D 2006 J. Comput. Phys. 214 491 [40] Zhao Y, Liu H, Lu Z Y and Sun C C 2008 Chin. J. Chem. Phys. 21 451 |